Unweighted estimate of autosomal theta from subpopulations of genotypes

Source: R/RcppExports.R

Estimates unweighted autosomal theta for a number of subpopulations given a list of subpopulations of genotypes.

estimate_autotheta_subpops_unweighted_genotypes(subpops, assume_HWE)

Arguments

subpops

List of individual genotypes

assume_HWE

if the alleles themselves are used instead of genotypes

Value

Estimate of autosomal theta

Details

Assumes that pedigrees_all_populate_autosomal() was used first to populate autosomal genotypes.

Based on Weir and Goudet, Genetics 2017: http://www.genetics.org/content/early/2017/05/26/genetics.116.198424